Our Expertise

The Schmidt lab conducts computational research on all facets of healthcare, with a strong emphasis on cardiovascular/cardiometabolic diseases.

The group has long running expertise in:

  • Leveraging common and rare human genetics for causal analysis, particularly focusing on genetically informed drug development
  • Omics and imaging risk factor identification for disease onset, progression
  • Utilising electronic healthcare records for evaluation and development of risk prediction models
  • Integrating imaging/physiological data with omics and/or electronic healthcare records

For this we utilise methods from computational genetics, (clinical) epidemiology, machine/deep learning, and general bioinformatics.

Genetically guided drug development

Together with Professor Hingorani and Dr Finan, we have pioneered using human genetics to inform drug development. Our work has provided the underpinnings for scaled cis Mendelian randomisation, which we have used, in combination with other computational genetics tools, to conduct applied research on drug target identification.

Key contributions:

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Risk factor identification and prediction modelling

In collaboration with Professor Chaturvedi and Asselbergs, we have highlighted the challenges of developing accurate cardiovascular (CV) prediction models in people with established diseases such as type 2 diabetes. To ameliorate this we employed scalable machine learning methods to identify novel non-traditional risk factors, as well as explore model repurposing (i.e. transfer learning), and de novo model development.

Key contributions:

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Multi-modal imaging

Through strong collaboration with Dr Sudre and Dr Paliwal we have sought to combine evidence from cardiac MRI with information from brain MRI, proteomics, or rare genetic carriership to identify novel pathways and risk factors of (shared) disease.

Key contributions:

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